Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ptchd3Q0EEE2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Gm9726-201ENSMUST00000180321 678 ntBASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ptchd3Q0EEE2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Gm13597-201ENSMUST00000121239 375 ntBASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms