Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox4Q06831 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox4Q06831 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox4Q06831 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox4Q06831 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Sox4Q06831 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox4Q06831 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox4Q06831 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox4Q06831 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.97□□□□□ -0.17
Sox4Q06831 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox4Q06831 Gm27321-201ENSMUST00000185021 205 ntBASIC13.97□□□□□ -0.17
Sox4Q06831 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Sox4Q06831 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox4Q06831 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.97□□□□□ -0.17
Sox4Q06831 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox4Q06831 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Sox4Q06831 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox4Q06831 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox4Q06831 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox4Q06831 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox4Q06831 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox4Q06831 Gm43703-201ENSMUST00000200523 763 ntBASIC13.96□□□□□ -0.17
Sox4Q06831 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox4Q06831 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox4Q06831 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox4Q06831 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.96□□□□□ -0.18
Sox4Q06831 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.96□□□□□ -0.18
Sox4Q06831 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Sox4Q06831 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox4Q06831 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Sox4Q06831 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sox4Q06831 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox4Q06831 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.95□□□□□ -0.18
Sox4Q06831 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms