Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.23□□□□□ -0.77
Hspg2Q05793 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Gm8959-201ENSMUST00000213150 571 ntBASIC10.23□□□□□ -0.77
Hspg2Q05793 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hspg2Q05793 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC10.22□□□□□ -0.77
Hspg2Q05793 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm5363-201ENSMUST00000211927 938 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.22□□□□□ -0.77
Hspg2Q05793 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Hspg2Q05793 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hspg2Q05793 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Gm12882-201ENSMUST00000121696 517 ntBASIC10.21□□□□□ -0.77
Hspg2Q05793 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.21□□□□□ -0.77
Hspg2Q05793 Gm6407-201ENSMUST00000176468 549 ntBASIC10.21□□□□□ -0.77
Hspg2Q05793 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.21□□□□□ -0.77
Hspg2Q05793 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Hspg2Q05793 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.77
Hspg2Q05793 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 Gm5687-201ENSMUST00000118252 640 ntBASIC10.21□□□□□ -0.77
Hspg2Q05793 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hspg2Q05793 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.21□□□□□ -0.77
Hspg2Q05793 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.21□□□□□ -0.77
Hspg2Q05793 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms