Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.21□□□□□ -0.45
Smn1P97801 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.21□□□□□ -0.45
Smn1P97801 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smn1P97801 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smn1P97801 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.2□□□□□ -0.46
Smn1P97801 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.2□□□□□ -0.46
Smn1P97801 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.2□□□□□ -0.46
Smn1P97801 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.2□□□□□ -0.46
Smn1P97801 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.2□□□□□ -0.46
Smn1P97801 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Smn1P97801 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.2□□□□□ -0.46
Smn1P97801 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.2□□□□□ -0.46
Smn1P97801 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Birc2-201ENSMUST00000054878 378 ntBASIC12.2□□□□□ -0.46
Smn1P97801 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smn1P97801 Rps4l-201ENSMUST00000071745 943 ntBASIC12.2□□□□□ -0.46
Smn1P97801 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Smn1P97801 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smn1P97801 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.19□□□□□ -0.46
Smn1P97801 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.19□□□□□ -0.46
Smn1P97801 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.19□□□□□ -0.46
Smn1P97801 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.19□□□□□ -0.46
Smn1P97801 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.19□□□□□ -0.46
Smn1P97801 Gm7153-201ENSMUST00000117092 455 ntBASIC12.19□□□□□ -0.46
Smn1P97801 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.19□□□□□ -0.46
Smn1P97801 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.19□□□□□ -0.46
Smn1P97801 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.19□□□□□ -0.46
Smn1P97801 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.19□□□□□ -0.46
Smn1P97801 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smn1P97801 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.18□□□□□ -0.46
Smn1P97801 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.18□□□□□ -0.46
Smn1P97801 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 175.7 ms