Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Gm25214-201ENSMUST00000104573 129 ntBASIC9.46□□□□□ -0.89
PrkdcP97313 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.46□□□□□ -0.89
PrkdcP97313 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.46□□□□□ -0.89
PrkdcP97313 Ighv8-14-201ENSMUST00000196781 358 ntBASIC9.46□□□□□ -0.89
PrkdcP97313 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
PrkdcP97313 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
PrkdcP97313 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.46□□□□□ -0.89
PrkdcP97313 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
PrkdcP97313 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.46□□□□□ -0.89
PrkdcP97313 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.46□□□□□ -0.89
PrkdcP97313 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.46□□□□□ -0.89
PrkdcP97313 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.46□□□□□ -0.89
PrkdcP97313 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.46□□□□□ -0.89
PrkdcP97313 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.46□□□□□ -0.89
PrkdcP97313 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PrkdcP97313 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Gm10434-201ENSMUST00000101158 471 ntBASIC9.46□□□□□ -0.9
PrkdcP97313 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC9.46□□□□□ -0.9
PrkdcP97313 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.46□□□□□ -0.9
PrkdcP97313 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.46□□□□□ -0.9
PrkdcP97313 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC9.46□□□□□ -0.9
PrkdcP97313 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
PrkdcP97313 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Gm27528-202ENSMUST00000222916 2012 ntBASIC9.46□□□□□ -0.9
PrkdcP97313 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
PrkdcP97313 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
PrkdcP97313 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
PrkdcP97313 Gm37905-201ENSMUST00000195310 341 ntBASIC9.46□□□□□ -0.9
PrkdcP97313 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Gm5369-201ENSMUST00000217499 588 ntBASIC9.46□□□□□ -0.9
PrkdcP97313 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.46□□□□□ -0.9
PrkdcP97313 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PrkdcP97313 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC9.45□□□□□ -0.9
PrkdcP97313 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.45□□□□□ -0.9
PrkdcP97313 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Gm12029-201ENSMUST00000120073 832 ntBASIC9.45□□□□□ -0.9
PrkdcP97313 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.45□□□□□ -0.9
PrkdcP97313 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.45□□□□□ -0.9
PrkdcP97313 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Gm44262-201ENSMUST00000204969 372 ntBASIC9.45□□□□□ -0.9
PrkdcP97313 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC9.45□□□□□ -0.9
PrkdcP97313 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
PrkdcP97313 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PrkdcP97313 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.45□□□□□ -0.9
PrkdcP97313 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC9.45□□□□□ -0.9
PrkdcP97313 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC9.45□□□□□ -0.9
PrkdcP97313 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.45□□□□□ -0.9
PrkdcP97313 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC9.45□□□□□ -0.9
PrkdcP97313 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms