Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.7□□□□□ -0.38
SgcbP82349 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.7□□□□□ -0.38
SgcbP82349 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.7□□□□□ -0.38
SgcbP82349 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SgcbP82349 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SgcbP82349 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SgcbP82349 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SgcbP82349 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.69□□□□□ -0.38
SgcbP82349 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SgcbP82349 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.69□□□□□ -0.38
SgcbP82349 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
SgcbP82349 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Gm45453-201ENSMUST00000211758 853 ntBASIC12.69□□□□□ -0.38
SgcbP82349 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.69□□□□□ -0.38
SgcbP82349 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SgcbP82349 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.69□□□□□ -0.38
SgcbP82349 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.69□□□□□ -0.38
SgcbP82349 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SgcbP82349 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SgcbP82349 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SgcbP82349 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SgcbP82349 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SgcbP82349 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Gm13453-201ENSMUST00000118708 357 ntBASIC12.68□□□□□ -0.38
SgcbP82349 Gm14767-201ENSMUST00000121559 586 ntBASIC12.68□□□□□ -0.38
SgcbP82349 Mir1897-201ENSMUST00000122581 272 ntBASIC12.68□□□□□ -0.38
SgcbP82349 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SgcbP82349 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SgcbP82349 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcbP82349 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SgcbP82349 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcbP82349 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SgcbP82349 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.67□□□□□ -0.38
SgcbP82349 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcbP82349 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SgcbP82349 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.67□□□□□ -0.38
SgcbP82349 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.67□□□□□ -0.38
SgcbP82349 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.67□□□□□ -0.38
SgcbP82349 Gm27533-201ENSMUST00000183800 152 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms