Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.06□□□□□ -0.16
Shox2P70390 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.06□□□□□ -0.16
Shox2P70390 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.05□□□□□ -0.16
Shox2P70390 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Gm9182-201ENSMUST00000217829 639 ntBASIC14.05□□□□□ -0.16
Shox2P70390 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Shox2P70390 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.05□□□□□ -0.16
Shox2P70390 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.05□□□□□ -0.16
Shox2P70390 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shox2P70390 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.04□□□□□ -0.16
Shox2P70390 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shox2P70390 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Shox2P70390 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shox2P70390 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.04□□□□□ -0.16
Shox2P70390 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.04□□□□□ -0.16
Shox2P70390 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.04□□□□□ -0.16
Shox2P70390 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shox2P70390 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Shox2P70390 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shox2P70390 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.04□□□□□ -0.16
Shox2P70390 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Shox2P70390 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shox2P70390 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.03□□□□□ -0.16
Shox2P70390 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms