Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Gm7774-201ENSMUST00000200064 533 ntBASIC11.86□□□□□ -0.51
Pdlim4P70271 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.86□□□□□ -0.51
Pdlim4P70271 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.86□□□□□ -0.51
Pdlim4P70271 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Gm10253-201ENSMUST00000194270 940 ntBASIC11.85□□□□□ -0.51
Pdlim4P70271 Gm18049-201ENSMUST00000208909 581 ntBASIC11.85□□□□□ -0.51
Pdlim4P70271 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.85□□□□□ -0.51
Pdlim4P70271 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim4P70271 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim4P70271 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim4P70271 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim4P70271 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim4P70271 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim4P70271 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Pdlim4P70271 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm22065-201ENSMUST00000103753 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm22066-201ENSMUST00000103761 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm24932-201ENSMUST00000103763 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm24115-201ENSMUST00000103799 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm22190-201ENSMUST00000103827 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm22191-201ENSMUST00000103831 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm24721-201ENSMUST00000103849 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm28018-201ENSMUST00000103869 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm26399-201ENSMUST00000103937 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.84□□□□□ -0.51
Pdlim4P70271 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim4P70271 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm25349-201ENSMUST00000177728 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm23616-201ENSMUST00000177797 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm25871-201ENSMUST00000177816 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm24752-201ENSMUST00000178240 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm24496-201ENSMUST00000178287 110 ntBASIC11.84□□□□□ -0.51
Pdlim4P70271 Gm25649-201ENSMUST00000178476 110 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms