Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.65■□□□□ 0.1
Hmgb1P63158 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hmgb1P63158 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.65■□□□□ 0.1
Hmgb1P63158 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.65■□□□□ 0.1
Hmgb1P63158 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Gm10652-201ENSMUST00000199790 2622 ntBASIC15.65■□□□□ 0.1
Hmgb1P63158 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hmgb1P63158 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.65■□□□□ 0.1
Hmgb1P63158 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgb1P63158 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.65■□□□□ 0.1
Hmgb1P63158 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Hmgb1P63158 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Hmgb1P63158 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Gm12882-201ENSMUST00000121696 517 ntBASIC15.64■□□□□ 0.09
Hmgb1P63158 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.64■□□□□ 0.09
Hmgb1P63158 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Hmgb1P63158 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Hmgb1P63158 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgb1P63158 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hmgb1P63158 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.63■□□□□ 0.09
Hmgb1P63158 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hmgb1P63158 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hmgb1P63158 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.63■□□□□ 0.09
Hmgb1P63158 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.63■□□□□ 0.09
Hmgb1P63158 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgb1P63158 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms