Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.56□□□□□ -0.4
Sec61a1P61620 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sec61a1P61620 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Gm23935-201ENSMUST00000102303 57 ntBASIC12.56□□□□□ -0.4
Sec61a1P61620 Gm24270-201ENSMUST00000102326 57 ntBASIC12.56□□□□□ -0.4
Sec61a1P61620 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.56□□□□□ -0.4
Sec61a1P61620 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.56□□□□□ -0.4
Sec61a1P61620 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.56□□□□□ -0.4
Sec61a1P61620 Gm24245-201ENSMUST00000157318 57 ntBASIC12.56□□□□□ -0.4
Sec61a1P61620 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
Sec61a1P61620 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.56□□□□□ -0.4
Sec61a1P61620 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Sec61a1P61620 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Acot6-202ENSMUST00000222921 3622 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gm17271-201ENSMUST00000165535 355 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gm5177-201ENSMUST00000183092 997 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gm45747-201ENSMUST00000212203 999 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.55□□□□□ -0.4
Sec61a1P61620 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sec61a1P61620 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61a1P61620 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Gm2756-201ENSMUST00000195851 400 ntBASIC12.54□□□□□ -0.4
Sec61a1P61620 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.54□□□□□ -0.4
Sec61a1P61620 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sec61a1P61620 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61a1P61620 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms