Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tpm1P58771 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Tpm1P58771 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Tpm1P58771 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.87■□□□□ 0.13
Tpm1P58771 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.87■□□□□ 0.13
Tpm1P58771 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.87■□□□□ 0.13
Tpm1P58771 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.87■□□□□ 0.13
Tpm1P58771 Gm43347-201ENSMUST00000200226 580 ntBASIC15.87■□□□□ 0.13
Tpm1P58771 Gm45167-201ENSMUST00000208007 322 ntBASIC15.87■□□□□ 0.13
Tpm1P58771 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Tpm1P58771 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.87■□□□□ 0.13
Tpm1P58771 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.87■□□□□ 0.13
Tpm1P58771 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tpm1P58771 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpm1P58771 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Tpm1P58771 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Gm15173-201ENSMUST00000122049 433 ntBASIC15.86■□□□□ 0.13
Tpm1P58771 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.86■□□□□ 0.13
Tpm1P58771 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.86■□□□□ 0.13
Tpm1P58771 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.86■□□□□ 0.13
Tpm1P58771 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.86■□□□□ 0.13
Tpm1P58771 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.86■□□□□ 0.13
Tpm1P58771 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.86■□□□□ 0.13
Tpm1P58771 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Tpm1P58771 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpm1P58771 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tpm1P58771 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.85■□□□□ 0.13
Tpm1P58771 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
Tpm1P58771 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Gm7230-201ENSMUST00000173026 815 ntBASIC15.85■□□□□ 0.13
Tpm1P58771 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tpm1P58771 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Gm6550-201ENSMUST00000187574 993 ntBASIC15.85■□□□□ 0.13
Tpm1P58771 Gm6376-201ENSMUST00000209407 580 ntBASIC15.85■□□□□ 0.13
Tpm1P58771 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tpm1P58771 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.85■□□□□ 0.13
Tpm1P58771 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms