Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.28□□□□□ -0.12
SmoP56726 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
SmoP56726 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Gm5866-201ENSMUST00000177881 973 ntBASIC14.28□□□□□ -0.12
SmoP56726 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.28□□□□□ -0.12
SmoP56726 Gm21470-201ENSMUST00000187680 696 ntBASIC14.28□□□□□ -0.12
SmoP56726 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.28□□□□□ -0.12
SmoP56726 Gm44855-201ENSMUST00000205725 362 ntBASIC14.28□□□□□ -0.12
SmoP56726 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.28□□□□□ -0.12
SmoP56726 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.28□□□□□ -0.12
SmoP56726 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.28□□□□□ -0.12
SmoP56726 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.28□□□□□ -0.12
SmoP56726 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.28□□□□□ -0.12
SmoP56726 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SmoP56726 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.28□□□□□ -0.12
SmoP56726 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SmoP56726 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SmoP56726 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SmoP56726 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SmoP56726 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SmoP56726 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.27□□□□□ -0.12
SmoP56726 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SmoP56726 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SmoP56726 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SmoP56726 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SmoP56726 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SmoP56726 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.27□□□□□ -0.13
SmoP56726 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.27□□□□□ -0.13
SmoP56726 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SmoP56726 Gm7063-201ENSMUST00000186840 981 ntBASIC14.27□□□□□ -0.13
SmoP56726 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SmoP56726 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SmoP56726 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SmoP56726 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SmoP56726 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.26□□□□□ -0.13
SmoP56726 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.26□□□□□ -0.13
SmoP56726 Gm21854-201ENSMUST00000179901 471 ntBASIC14.26□□□□□ -0.13
SmoP56726 Gm37714-201ENSMUST00000194742 342 ntBASIC14.26□□□□□ -0.13
SmoP56726 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.26□□□□□ -0.13
SmoP56726 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.26□□□□□ -0.13
SmoP56726 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SmoP56726 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SmoP56726 Syt7-205ENSMUST00000224135 1557 ntBASIC14.26□□□□□ -0.13
SmoP56726 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SmoP56726 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms