Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lim2P56563 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lim2P56563 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lim2P56563 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lim2P56563 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Lim2P56563 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.24□□□□□ -0.13
Lim2P56563 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lim2P56563 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Lim2P56563 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.23□□□□□ -0.13
Lim2P56563 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.23□□□□□ -0.13
Lim2P56563 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lim2P56563 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lim2P56563 Gm24543-201ENSMUST00000103867 82 ntBASIC14.23□□□□□ -0.13
Lim2P56563 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Gm27631-201ENSMUST00000184163 466 ntBASIC14.23□□□□□ -0.13
Lim2P56563 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.23□□□□□ -0.13
Lim2P56563 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.23□□□□□ -0.13
Lim2P56563 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Lim2P56563 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lim2P56563 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Lim2P56563 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lim2P56563 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lim2P56563 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Lim2P56563 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.22□□□□□ -0.13
Lim2P56563 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lim2P56563 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Lim2P56563 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.22□□□□□ -0.13
Lim2P56563 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.22□□□□□ -0.13
Lim2P56563 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lim2P56563 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Auts2-212ENSMUST00000178555 309 ntBASIC14.22□□□□□ -0.13
Lim2P56563 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Gm17837-201ENSMUST00000186435 985 ntBASIC14.22□□□□□ -0.13
Lim2P56563 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.22□□□□□ -0.13
Lim2P56563 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.22□□□□□ -0.13
Lim2P56563 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Lim2P56563 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lim2P56563 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lim2P56563 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lim2P56563 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Gm13223-201ENSMUST00000118609 747 ntBASIC14.21□□□□□ -0.13
Lim2P56563 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lim2P56563 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.21□□□□□ -0.13
Lim2P56563 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.21□□□□□ -0.13
Lim2P56563 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lim2P56563 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms