Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.22□□□□□ -0.13
Fdft1P53798 Gm14042-201ENSMUST00000120139 833 ntBASIC14.22□□□□□ -0.13
Fdft1P53798 Gm11543-201ENSMUST00000120758 370 ntBASIC14.22□□□□□ -0.13
Fdft1P53798 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Fdft1P53798 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.22□□□□□ -0.13
Fdft1P53798 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fdft1P53798 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.21□□□□□ -0.13
Fdft1P53798 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.21□□□□□ -0.13
Fdft1P53798 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Fdft1P53798 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.21□□□□□ -0.13
Fdft1P53798 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
Fdft1P53798 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Fdft1P53798 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Fdft1P53798 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Fdft1P53798 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fdft1P53798 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fdft1P53798 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Fdft1P53798 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Fdft1P53798 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fdft1P53798 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fdft1P53798 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.2□□□□□ -0.14
Fdft1P53798 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.2□□□□□ -0.14
Fdft1P53798 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.2□□□□□ -0.14
Fdft1P53798 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.2□□□□□ -0.14
Fdft1P53798 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.2□□□□□ -0.14
Fdft1P53798 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.2□□□□□ -0.14
Fdft1P53798 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Fdft1P53798 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.2□□□□□ -0.14
Fdft1P53798 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.2□□□□□ -0.14
Fdft1P53798 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fdft1P53798 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Fdft1P53798 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms