Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.44□□□□□ -0.1
Sox1P53783 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox1P53783 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Gm44397-201ENSMUST00000195950 113 ntBASIC14.44□□□□□ -0.1
Sox1P53783 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox1P53783 Gm8805-201ENSMUST00000117848 313 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox1P53783 Gm20482-202ENSMUST00000174729 825 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sox1P53783 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox1P53783 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox1P53783 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.43□□□□□ -0.1
Sox1P53783 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox1P53783 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox1P53783 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox1P53783 Gm15370-201ENSMUST00000117158 253 ntBASIC14.42□□□□□ -0.1
Sox1P53783 Gm12203-201ENSMUST00000118235 598 ntBASIC14.42□□□□□ -0.1
Sox1P53783 Gm12209-201ENSMUST00000120089 596 ntBASIC14.42□□□□□ -0.1
Sox1P53783 Gm13786-201ENSMUST00000122371 333 ntBASIC14.42□□□□□ -0.1
Sox1P53783 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox1P53783 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox1P53783 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.42□□□□□ -0.1
Sox1P53783 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.42□□□□□ -0.1
Sox1P53783 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.42□□□□□ -0.1
Sox1P53783 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.42□□□□□ -0.1
Sox1P53783 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox1P53783 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox1P53783 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms