Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.03■□□□□ -0
Shmt1P50431 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.03■□□□□ -0
Shmt1P50431 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.03■□□□□ -0
Shmt1P50431 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Shmt1P50431 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.03■□□□□ -0
Shmt1P50431 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Shmt1P50431 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.02■□□□□ -0
Shmt1P50431 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.02■□□□□ -0
Shmt1P50431 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Shmt1P50431 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Shmt1P50431 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Shmt1P50431 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.02■□□□□ -0
Shmt1P50431 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.02■□□□□ -0
Shmt1P50431 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.02■□□□□ -0
Shmt1P50431 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.02■□□□□ -0
Shmt1P50431 Gm29667-201ENSMUST00000190817 490 ntBASIC15.02■□□□□ -0
Shmt1P50431 Gm33320-201ENSMUST00000192232 530 ntBASIC15.02■□□□□ -0
Shmt1P50431 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.02■□□□□ -0
Shmt1P50431 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.02■□□□□ -0
Shmt1P50431 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.02■□□□□ -0
Shmt1P50431 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt1P50431 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.02■□□□□ -0
Shmt1P50431 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt1P50431 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.02□□□□□ -0.01
Shmt1P50431 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt1P50431 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt1P50431 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt1P50431 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt1P50431 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt1P50431 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.01□□□□□ -0.01
Shmt1P50431 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.01□□□□□ -0.01
Shmt1P50431 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.01□□□□□ -0.01
Shmt1P50431 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Shmt1P50431 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.01□□□□□ -0.01
Shmt1P50431 Gm15460-201ENSMUST00000118147 391 ntBASIC15.01□□□□□ -0.01
Shmt1P50431 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Shmt1P50431 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Shmt1P50431 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Gm27838-201ENSMUST00000184829 128 ntBASIC15.01□□□□□ -0.01
Shmt1P50431 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.01□□□□□ -0.01
Shmt1P50431 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Shmt1P50431 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Shmt1P50431 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt1P50431 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15□□□□□ -0.01
Shmt1P50431 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15□□□□□ -0.01
Shmt1P50431 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Shmt1P50431 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15□□□□□ -0.01
Shmt1P50431 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Syt7-204ENSMUST00000223586 1344 ntBASIC15□□□□□ -0.01
Shmt1P50431 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Gm15321-201ENSMUST00000121290 288 ntBASIC15□□□□□ -0.01
Shmt1P50431 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15□□□□□ -0.01
Shmt1P50431 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15□□□□□ -0.01
Shmt1P50431 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shmt1P50431 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Shmt1P50431 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15□□□□□ -0.01
Shmt1P50431 Gm7390-201ENSMUST00000212452 1216 ntBASIC15□□□□□ -0.01
Shmt1P50431 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shmt1P50431 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shmt1P50431 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms