Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gm12260-201ENSMUST00000122447 411 ntBASIC12.86□□□□□ -0.35
Rfx3P48381 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.86□□□□□ -0.35
Rfx3P48381 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gm45747-201ENSMUST00000212203 999 ntBASIC12.86□□□□□ -0.35
Rfx3P48381 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gm5867-201ENSMUST00000063197 592 ntBASIC12.86□□□□□ -0.35
Rfx3P48381 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.86□□□□□ -0.35
Rfx3P48381 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rfx3P48381 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx3P48381 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.85□□□□□ -0.35
Rfx3P48381 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Rfx3P48381 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rfx3P48381 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.85□□□□□ -0.35
Rfx3P48381 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Gm9385-201ENSMUST00000117563 472 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Mir8117-201ENSMUST00000184773 107 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Gm8000-201ENSMUST00000188378 592 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Gm17968-201ENSMUST00000194902 784 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Gm2451-201ENSMUST00000199447 999 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Gm10290-201ENSMUST00000200451 999 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Gm9182-201ENSMUST00000217829 639 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rfx3P48381 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx3P48381 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.85□□□□□ -0.35
Rfx3P48381 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rfx3P48381 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.84□□□□□ -0.35
Rfx3P48381 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Gm44492-201ENSMUST00000197012 141 ntBASIC12.84□□□□□ -0.35
Rfx3P48381 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.84□□□□□ -0.35
Rfx3P48381 Olfr286-202ENSMUST00000205305 969 ntBASIC12.84□□□□□ -0.35
Rfx3P48381 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.84□□□□□ -0.35
Rfx3P48381 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.84□□□□□ -0.35
Rfx3P48381 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx3P48381 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx3P48381 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms