Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
Msh2P43247 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Msh2P43247 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.66□□□□□ -0.06
Msh2P43247 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.66□□□□□ -0.06
Msh2P43247 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.66□□□□□ -0.06
Msh2P43247 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Msh2P43247 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Msh2P43247 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Msh2P43247 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.65□□□□□ -0.06
Msh2P43247 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Msh2P43247 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Msh2P43247 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Msh2P43247 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.65□□□□□ -0.06
Msh2P43247 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Msh2P43247 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.65□□□□□ -0.06
Msh2P43247 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.65□□□□□ -0.06
Msh2P43247 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.65□□□□□ -0.06
Msh2P43247 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.65□□□□□ -0.06
Msh2P43247 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.65□□□□□ -0.06
Msh2P43247 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.65□□□□□ -0.06
Msh2P43247 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Msh2P43247 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Msh2P43247 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.65□□□□□ -0.06
Msh2P43247 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Msh2P43247 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Msh2P43247 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.64□□□□□ -0.07
Msh2P43247 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.64□□□□□ -0.07
Msh2P43247 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Msh2P43247 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Msh2P43247 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Msh2P43247 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.64□□□□□ -0.07
Msh2P43247 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh2P43247 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh2P43247 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.63□□□□□ -0.07
Msh2P43247 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh2P43247 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh2P43247 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msh2P43247 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms