Protein–RNA interactions for Protein: P43027

Gdf5, Growth/differentiation factor 5, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf5P43027 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.33□□□□□ -0.12
Gdf5P43027 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Gm44608-201ENSMUST00000206827 855 ntBASIC14.33□□□□□ -0.12
Gdf5P43027 Gm9229-201ENSMUST00000222777 126 ntBASIC14.33□□□□□ -0.12
Gdf5P43027 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.33□□□□□ -0.12
Gdf5P43027 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Gdf5P43027 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Gdf5P43027 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.33□□□□□ -0.12
Gdf5P43027 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gdf5P43027 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gdf5P43027 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gdf5P43027 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Gdf5P43027 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gdf5P43027 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Gm15487-201ENSMUST00000122373 465 ntBASIC14.32□□□□□ -0.12
Gdf5P43027 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.32□□□□□ -0.12
Gdf5P43027 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gdf5P43027 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.32□□□□□ -0.12
Gdf5P43027 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.32□□□□□ -0.12
Gdf5P43027 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.32□□□□□ -0.12
Gdf5P43027 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gdf5P43027 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.32□□□□□ -0.12
Gdf5P43027 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gdf5P43027 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.31□□□□□ -0.12
Gdf5P43027 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gdf5P43027 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gdf5P43027 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Gm4875-201ENSMUST00000118257 786 ntBASIC14.31□□□□□ -0.12
Gdf5P43027 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.31□□□□□ -0.12
Gdf5P43027 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.31□□□□□ -0.12
Gdf5P43027 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.31□□□□□ -0.12
Gdf5P43027 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.31□□□□□ -0.12
Gdf5P43027 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gdf5P43027 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Gdf5P43027 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gdf5P43027 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.31□□□□□ -0.12
Gdf5P43027 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gdf5P43027 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gdf5P43027 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gdf5P43027 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gdf5P43027 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gdf5P43027 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.3□□□□□ -0.12
Gdf5P43027 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gdf5P43027 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms