Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HttP42859 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.81□□□□□ -0.04
HttP42859 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HttP42859 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.81□□□□□ -0.04
HttP42859 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HttP42859 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.8□□□□□ -0.04
HttP42859 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.8□□□□□ -0.04
HttP42859 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.8□□□□□ -0.04
HttP42859 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.8□□□□□ -0.04
HttP42859 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.8□□□□□ -0.04
HttP42859 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.8□□□□□ -0.04
HttP42859 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Gm43378-201ENSMUST00000199336 582 ntBASIC14.8□□□□□ -0.04
HttP42859 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.8□□□□□ -0.04
HttP42859 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.8□□□□□ -0.04
HttP42859 Gm24447-201ENSMUST00000083977 338 ntBASIC14.8□□□□□ -0.04
HttP42859 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HttP42859 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HttP42859 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HttP42859 Gm11331-201ENSMUST00000119764 288 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm38317-201ENSMUST00000195564 343 ntBASIC14.79□□□□□ -0.04
HttP42859 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.79□□□□□ -0.04
HttP42859 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
HttP42859 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Gm12616-201ENSMUST00000118594 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm11667-201ENSMUST00000119828 486 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12624-201ENSMUST00000177615 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12621-201ENSMUST00000177760 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12615-201ENSMUST00000177970 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12622-201ENSMUST00000177975 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12627-201ENSMUST00000178412 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12625-201ENSMUST00000179122 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12614-201ENSMUST00000179586 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm12613-201ENSMUST00000180323 382 ntBASIC14.79□□□□□ -0.04
HttP42859 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.79□□□□□ -0.04
HttP42859 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.79□□□□□ -0.04
HttP42859 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.79□□□□□ -0.04
HttP42859 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
HttP42859 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HttP42859 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.79□□□□□ -0.04
HttP42859 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.79□□□□□ -0.04
HttP42859 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HttP42859 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HttP42859 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HttP42859 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HttP42859 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.78□□□□□ -0.04
HttP42859 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.78□□□□□ -0.04
HttP42859 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.78□□□□□ -0.04
HttP42859 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.78□□□□□ -0.04
HttP42859 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms