Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Gm11543-201ENSMUST00000120758 370 ntBASIC15.3■□□□□ 0.04
Pbx1P41778 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.3■□□□□ 0.04
Pbx1P41778 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.3■□□□□ 0.04
Pbx1P41778 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.3■□□□□ 0.04
Pbx1P41778 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pbx1P41778 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pbx1P41778 BC001981-202ENSMUST00000191393 1545 ntBASIC15.3■□□□□ 0.04
Pbx1P41778 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.3■□□□□ 0.04
Pbx1P41778 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.3■□□□□ 0.04
Pbx1P41778 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.3■□□□□ 0.04
Pbx1P41778 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.3■□□□□ 0.04
Pbx1P41778 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pbx1P41778 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pbx1P41778 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pbx1P41778 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Pbx1P41778 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.29■□□□□ 0.04
Pbx1P41778 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pbx1P41778 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Pbx1P41778 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.29■□□□□ 0.04
Pbx1P41778 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.29■□□□□ 0.04
Pbx1P41778 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.29■□□□□ 0.04
Pbx1P41778 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.29■□□□□ 0.04
Pbx1P41778 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.29■□□□□ 0.04
Pbx1P41778 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pbx1P41778 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.29■□□□□ 0.04
Pbx1P41778 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.29■□□□□ 0.04
Pbx1P41778 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pbx1P41778 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pbx1P41778 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pbx1P41778 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Gm2810-201ENSMUST00000118681 990 ntBASIC15.28■□□□□ 0.04
Pbx1P41778 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.28■□□□□ 0.04
Pbx1P41778 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.28■□□□□ 0.04
Pbx1P41778 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.28■□□□□ 0.04
Pbx1P41778 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.28■□□□□ 0.04
Pbx1P41778 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.28■□□□□ 0.04
Pbx1P41778 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.28■□□□□ 0.04
Pbx1P41778 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.28■□□□□ 0.04
Pbx1P41778 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pbx1P41778 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.28■□□□□ 0.04
Pbx1P41778 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.28■□□□□ 0.04
Pbx1P41778 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pbx1P41778 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms