Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd9P40240 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.02□□□□□ -0.17
Cd9P40240 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd9P40240 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd9P40240 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Cd9P40240 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd9P40240 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd9P40240 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd9P40240 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cd9P40240 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cd9P40240 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.01□□□□□ -0.17
Cd9P40240 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Cd9P40240 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cd9P40240 Gm23935-201ENSMUST00000102303 57 ntBASIC14.01□□□□□ -0.17
Cd9P40240 Gm24270-201ENSMUST00000102326 57 ntBASIC14.01□□□□□ -0.17
Cd9P40240 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Gm24245-201ENSMUST00000157318 57 ntBASIC14.01□□□□□ -0.17
Cd9P40240 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.01□□□□□ -0.17
Cd9P40240 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.01□□□□□ -0.17
Cd9P40240 Gm18027-201ENSMUST00000218947 619 ntBASIC14.01□□□□□ -0.17
Cd9P40240 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Cd9P40240 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cd9P40240 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd9P40240 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cd9P40240 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Cd9P40240 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cd9P40240 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cd9P40240 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Gm11405-201ENSMUST00000118689 1556 ntBASIC14□□□□□ -0.17
Cd9P40240 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cd9P40240 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cd9P40240 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Mypopos-202ENSMUST00000205975 2321 ntBASIC14□□□□□ -0.17
Cd9P40240 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cd9P40240 Gm27622-201ENSMUST00000183779 60 ntBASIC14□□□□□ -0.17
Cd9P40240 Gm27533-201ENSMUST00000183800 152 ntBASIC14□□□□□ -0.17
Cd9P40240 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cd9P40240 AC121804.3-201ENSMUST00000223420 295 ntBASIC14□□□□□ -0.17
Cd9P40240 CT030704.2-201ENSMUST00000228887 494 ntBASIC14□□□□□ -0.17
Cd9P40240 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cd9P40240 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14□□□□□ -0.17
Cd9P40240 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14□□□□□ -0.17
Cd9P40240 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14□□□□□ -0.17
Cd9P40240 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Cd9P40240 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cd9P40240 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd9P40240 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
Cd9P40240 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cd9P40240 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cd9P40240 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd9P40240 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms