Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.53□□□□□ -0.08
Cxcl12P40224 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cxcl12P40224 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.53□□□□□ -0.08
Cxcl12P40224 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cxcl12P40224 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cxcl12P40224 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cxcl12P40224 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cxcl12P40224 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cxcl12P40224 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.52□□□□□ -0.08
Cxcl12P40224 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cxcl12P40224 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.52□□□□□ -0.08
Cxcl12P40224 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.52□□□□□ -0.09
Cxcl12P40224 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Gm6152-201ENSMUST00000151704 340 ntBASIC14.52□□□□□ -0.09
Cxcl12P40224 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.52□□□□□ -0.09
Cxcl12P40224 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.52□□□□□ -0.09
Cxcl12P40224 Gm43758-201ENSMUST00000199500 367 ntBASIC14.52□□□□□ -0.09
Cxcl12P40224 Gm3786-201ENSMUST00000202659 378 ntBASIC14.52□□□□□ -0.09
Cxcl12P40224 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.52□□□□□ -0.09
Cxcl12P40224 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.52□□□□□ -0.09
Cxcl12P40224 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.52□□□□□ -0.09
Cxcl12P40224 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.52□□□□□ -0.09
Cxcl12P40224 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cxcl12P40224 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Prob1-201ENSMUST00000097619 3021 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm22018-201ENSMUST00000104357 131 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm8213-201ENSMUST00000118191 441 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm43118-201ENSMUST00000199149 775 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm18935-201ENSMUST00000212692 664 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm9368-201ENSMUST00000219348 831 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm8598-201ENSMUST00000221184 836 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Sybu-209ENSMUST00000228639 4113 ntBASIC14.51□□□□□ -0.09
Cxcl12P40224 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.51□□□□□ -0.09
Cxcl12P40224 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cxcl12P40224 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms