Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 AA543401-201ENSMUST00000164248 1269 ntBASIC13.63□□□□□ -0.23
Cdh4P39038 Gm27631-201ENSMUST00000184163 466 ntBASIC13.63□□□□□ -0.23
Cdh4P39038 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdh4P39038 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cdh4P39038 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.63□□□□□ -0.23
Cdh4P39038 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdh4P39038 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh4P39038 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Gm24543-201ENSMUST00000103867 82 ntBASIC13.62□□□□□ -0.23
Cdh4P39038 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh4P39038 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Gm25925-201ENSMUST00000158314 306 ntBASIC13.62□□□□□ -0.23
Cdh4P39038 Gm27618-201ENSMUST00000183671 60 ntBASIC13.62□□□□□ -0.23
Cdh4P39038 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.62□□□□□ -0.23
Cdh4P39038 AA619741-201ENSMUST00000195095 646 ntBASIC13.62□□□□□ -0.23
Cdh4P39038 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdh4P39038 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Gm45453-201ENSMUST00000211758 853 ntBASIC13.62□□□□□ -0.23
Cdh4P39038 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.62□□□□□ -0.23
Cdh4P39038 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdh4P39038 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh4P39038 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Cdh4P39038 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cdh4P39038 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.61□□□□□ -0.23
Cdh4P39038 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdh4P39038 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdh4P39038 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cdh4P39038 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.61□□□□□ -0.23
Cdh4P39038 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Cdh4P39038 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh4P39038 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdh4P39038 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh4P39038 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdh4P39038 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cdh4P39038 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Gm17837-201ENSMUST00000186435 985 ntBASIC13.6□□□□□ -0.23
Cdh4P39038 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdh4P39038 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdh4P39038 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.6□□□□□ -0.23
Cdh4P39038 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.6□□□□□ -0.23
Cdh4P39038 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh4P39038 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdh4P39038 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms