Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HmgclP38060 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HmgclP38060 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HmgclP38060 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
HmgclP38060 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HmgclP38060 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HmgclP38060 Gm24543-201ENSMUST00000103867 82 ntBASIC14.02□□□□□ -0.17
HmgclP38060 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.02□□□□□ -0.17
HmgclP38060 Gm25948-201ENSMUST00000175334 112 ntBASIC14.02□□□□□ -0.17
HmgclP38060 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.02□□□□□ -0.17
HmgclP38060 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
HmgclP38060 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HmgclP38060 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.02□□□□□ -0.17
HmgclP38060 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HmgclP38060 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HmgclP38060 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
HmgclP38060 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HmgclP38060 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.01□□□□□ -0.17
HmgclP38060 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.01□□□□□ -0.17
HmgclP38060 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.01□□□□□ -0.17
HmgclP38060 Gm12428-201ENSMUST00000119844 727 ntBASIC14.01□□□□□ -0.17
HmgclP38060 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HmgclP38060 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.01□□□□□ -0.17
HmgclP38060 AA543401-201ENSMUST00000164248 1269 ntBASIC14.01□□□□□ -0.17
HmgclP38060 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Gm27622-201ENSMUST00000183779 60 ntBASIC14.01□□□□□ -0.17
HmgclP38060 Gm27430-201ENSMUST00000184585 107 ntBASIC14.01□□□□□ -0.17
HmgclP38060 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Gm44333-201ENSMUST00000197168 107 ntBASIC14.01□□□□□ -0.17
HmgclP38060 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.01□□□□□ -0.17
HmgclP38060 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.01□□□□□ -0.17
HmgclP38060 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.01□□□□□ -0.17
HmgclP38060 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HmgclP38060 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14□□□□□ -0.17
HmgclP38060 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Gm26513-201ENSMUST00000181802 2489 ntBASIC14□□□□□ -0.17
HmgclP38060 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Gm8410-201ENSMUST00000117225 605 ntBASIC14□□□□□ -0.17
HmgclP38060 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14□□□□□ -0.17
HmgclP38060 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14□□□□□ -0.17
HmgclP38060 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Gm37171-201ENSMUST00000192636 1185 ntBASIC14□□□□□ -0.17
HmgclP38060 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HmgclP38060 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HmgclP38060 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14□□□□□ -0.17
HmgclP38060 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms