Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.16□□□□□ -0.14
LdlrP35951 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LdlrP35951 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LdlrP35951 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.16□□□□□ -0.14
LdlrP35951 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LdlrP35951 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.16□□□□□ -0.14
LdlrP35951 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.16□□□□□ -0.14
LdlrP35951 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LdlrP35951 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LdlrP35951 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LdlrP35951 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Gm15427-201ENSMUST00000117288 531 ntBASIC14.15□□□□□ -0.14
LdlrP35951 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.15□□□□□ -0.14
LdlrP35951 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.15□□□□□ -0.14
LdlrP35951 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.15□□□□□ -0.14
LdlrP35951 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.15□□□□□ -0.14
LdlrP35951 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LdlrP35951 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LdlrP35951 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.15□□□□□ -0.15
LdlrP35951 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
LdlrP35951 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
LdlrP35951 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.14□□□□□ -0.15
LdlrP35951 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LdlrP35951 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.14□□□□□ -0.15
LdlrP35951 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.14□□□□□ -0.15
LdlrP35951 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LdlrP35951 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.14□□□□□ -0.15
LdlrP35951 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.14□□□□□ -0.15
LdlrP35951 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.14□□□□□ -0.15
LdlrP35951 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LdlrP35951 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LdlrP35951 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms