Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.25□□□□□ -0.45
Slc6a1P31648 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc6a1P31648 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Slc6a1P31648 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm25990-201ENSMUST00000102440 86 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm4459-201ENSMUST00000118750 468 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44357-201ENSMUST00000195897 142 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm19658-201ENSMUST00000196231 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44367-201ENSMUST00000196836 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44350-201ENSMUST00000197197 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44390-201ENSMUST00000197533 144 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44313-201ENSMUST00000198018 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44486-201ENSMUST00000198508 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44314-201ENSMUST00000199263 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44394-201ENSMUST00000199558 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44484-201ENSMUST00000199873 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44466-201ENSMUST00000200264 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm44359-201ENSMUST00000200671 138 ntBASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Slc6a1P31648 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc6a1P31648 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.23□□□□□ -0.45
Slc6a1P31648 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.23□□□□□ -0.45
Slc6a1P31648 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a1P31648 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.23□□□□□ -0.45
Slc6a1P31648 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms