Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vcam1P29533 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.26■□□□□ 0.19
Vcam1P29533 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.26■□□□□ 0.19
Vcam1P29533 Gm6244-201ENSMUST00000178732 841 ntBASIC16.26■□□□□ 0.19
Vcam1P29533 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.26■□□□□ 0.19
Vcam1P29533 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.26■□□□□ 0.19
Vcam1P29533 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vcam1P29533 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.26■□□□□ 0.19
Vcam1P29533 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.26■□□□□ 0.19
Vcam1P29533 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Vcam1P29533 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcam1P29533 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vcam1P29533 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Vcam1P29533 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vcam1P29533 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.25■□□□□ 0.19
Vcam1P29533 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Gm5356-201ENSMUST00000093326 615 ntBASIC16.25■□□□□ 0.19
Vcam1P29533 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Vcam1P29533 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Vcam1P29533 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.25■□□□□ 0.19
Vcam1P29533 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcam1P29533 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.24■□□□□ 0.19
Vcam1P29533 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.24■□□□□ 0.19
Vcam1P29533 Gm13689-201ENSMUST00000119360 685 ntBASIC16.24■□□□□ 0.19
Vcam1P29533 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Vcam1P29533 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.24■□□□□ 0.19
Vcam1P29533 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.24■□□□□ 0.19
Vcam1P29533 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.24■□□□□ 0.19
Vcam1P29533 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.24■□□□□ 0.19
Vcam1P29533 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.24■□□□□ 0.19
Vcam1P29533 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Vcam1P29533 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vcam1P29533 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vcam1P29533 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Vcam1P29533 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.23■□□□□ 0.19
Vcam1P29533 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vcam1P29533 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vcam1P29533 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vcam1P29533 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.23■□□□□ 0.19
Vcam1P29533 Gm18062-201ENSMUST00000208020 547 ntBASIC16.23■□□□□ 0.19
Vcam1P29533 Gm18055-201ENSMUST00000208254 547 ntBASIC16.23■□□□□ 0.19
Vcam1P29533 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.23■□□□□ 0.19
Vcam1P29533 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms