Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CenpbP27790 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.19■□□□□ 0.66
CenpbP27790 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CenpbP27790 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CenpbP27790 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CenpbP27790 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CenpbP27790 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC19.18■□□□□ 0.66
CenpbP27790 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CenpbP27790 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CenpbP27790 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.17■□□□□ 0.66
CenpbP27790 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.17■□□□□ 0.66
CenpbP27790 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CenpbP27790 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CenpbP27790 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.17■□□□□ 0.66
CenpbP27790 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Gm7002-201ENSMUST00000221386 2165 ntBASIC19.17■□□□□ 0.66
CenpbP27790 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CenpbP27790 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CenpbP27790 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CenpbP27790 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC19.17■□□□□ 0.66
CenpbP27790 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CenpbP27790 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.17■□□□□ 0.66
CenpbP27790 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CenpbP27790 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.16■□□□□ 0.66
CenpbP27790 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.16■□□□□ 0.66
CenpbP27790 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CenpbP27790 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.16■□□□□ 0.66
CenpbP27790 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CenpbP27790 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CenpbP27790 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CenpbP27790 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC19.15■□□□□ 0.66
CenpbP27790 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CenpbP27790 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.15■□□□□ 0.66
CenpbP27790 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CenpbP27790 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Gm18263-201ENSMUST00000220846 1928 ntBASIC19.15■□□□□ 0.66
CenpbP27790 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CenpbP27790 Gm14371-201ENSMUST00000138925 1518 ntBASIC19.15■□□□□ 0.66
CenpbP27790 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CenpbP27790 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms