Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfrsf1bP25119 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Gm16476-201ENSMUST00000221544 139 ntBASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Shd-206ENSMUST00000225145 998 ntBASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 BC001981-202ENSMUST00000191393 1545 ntBASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tnfrsf1bP25119 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Gm13223-201ENSMUST00000118609 747 ntBASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfrsf1bP25119 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Gm13453-201ENSMUST00000118708 357 ntBASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms