Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.65□□□□□ -0.22
BdnfP21237 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
BdnfP21237 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.65□□□□□ -0.22
BdnfP21237 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.65□□□□□ -0.22
BdnfP21237 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.65□□□□□ -0.22
BdnfP21237 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.65□□□□□ -0.22
BdnfP21237 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.65□□□□□ -0.22
BdnfP21237 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
BdnfP21237 Gm18733-201ENSMUST00000173950 856 ntBASIC13.65□□□□□ -0.22
BdnfP21237 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.65□□□□□ -0.22
BdnfP21237 Gm27741-201ENSMUST00000185060 237 ntBASIC13.65□□□□□ -0.22
BdnfP21237 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.65□□□□□ -0.22
BdnfP21237 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.65□□□□□ -0.22
BdnfP21237 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.65□□□□□ -0.22
BdnfP21237 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.65□□□□□ -0.22
BdnfP21237 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.65□□□□□ -0.22
BdnfP21237 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
BdnfP21237 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BdnfP21237 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
BdnfP21237 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.65□□□□□ -0.23
BdnfP21237 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.64□□□□□ -0.23
BdnfP21237 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
BdnfP21237 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
BdnfP21237 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.64□□□□□ -0.23
BdnfP21237 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
BdnfP21237 Gm5177-201ENSMUST00000183092 997 ntBASIC13.64□□□□□ -0.23
BdnfP21237 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
BdnfP21237 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.64□□□□□ -0.23
BdnfP21237 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BdnfP21237 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.63□□□□□ -0.23
BdnfP21237 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.63□□□□□ -0.23
BdnfP21237 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.63□□□□□ -0.23
BdnfP21237 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.63□□□□□ -0.23
BdnfP21237 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Gm9385-201ENSMUST00000117563 472 ntBASIC13.63□□□□□ -0.23
BdnfP21237 Gm14140-201ENSMUST00000119999 995 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms