Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.43□□□□□ -0.1
VimP20152 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Gm6345-202ENSMUST00000180900 204 ntBASIC14.43□□□□□ -0.1
VimP20152 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.43□□□□□ -0.1
VimP20152 Gm8655-201ENSMUST00000221159 852 ntBASIC14.43□□□□□ -0.1
VimP20152 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.43□□□□□ -0.1
VimP20152 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VimP20152 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VimP20152 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VimP20152 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
VimP20152 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Gm10013-201ENSMUST00000106074 672 ntBASIC14.42□□□□□ -0.1
VimP20152 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VimP20152 Gm14042-201ENSMUST00000120139 833 ntBASIC14.42□□□□□ -0.1
VimP20152 Gm11950-201ENSMUST00000121615 838 ntBASIC14.42□□□□□ -0.1
VimP20152 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Gm29257-201ENSMUST00000186115 639 ntBASIC14.42□□□□□ -0.1
VimP20152 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.42□□□□□ -0.1
VimP20152 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VimP20152 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.42□□□□□ -0.1
VimP20152 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.42□□□□□ -0.1
VimP20152 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.42□□□□□ -0.1
VimP20152 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VimP20152 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.42□□□□□ -0.1
VimP20152 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.42□□□□□ -0.1
VimP20152 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VimP20152 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.41□□□□□ -0.1
VimP20152 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.41□□□□□ -0.1
VimP20152 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.41□□□□□ -0.1
VimP20152 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.41□□□□□ -0.1
VimP20152 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.41□□□□□ -0.1
VimP20152 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.41□□□□□ -0.1
VimP20152 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VimP20152 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.41□□□□□ -0.1
VimP20152 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.41□□□□□ -0.1
VimP20152 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VimP20152 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.4□□□□□ -0.1
VimP20152 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms