Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rb1P13405 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.6□□□□□ -0.07
Rb1P13405 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.6□□□□□ -0.07
Rb1P13405 Gm28630-201ENSMUST00000187806 498 ntBASIC14.6□□□□□ -0.07
Rb1P13405 Gm29541-201ENSMUST00000191351 678 ntBASIC14.6□□□□□ -0.07
Rb1P13405 Gm7730-201ENSMUST00000212486 454 ntBASIC14.6□□□□□ -0.07
Rb1P13405 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.6□□□□□ -0.07
Rb1P13405 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rb1P13405 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rb1P13405 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rb1P13405 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Rb1P13405 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.59□□□□□ -0.07
Rb1P13405 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Gm15483-201ENSMUST00000120338 456 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.59□□□□□ -0.07
Rb1P13405 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Gm27920-201ENSMUST00000183953 96 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rb1P13405 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.59□□□□□ -0.07
Rb1P13405 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Rb1P13405 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rb1P13405 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rb1P13405 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rb1P13405 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rb1P13405 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rb1P13405 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rb1P13405 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rb1P13405 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rb1P13405 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Rb1P13405 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rb1P13405 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Gm7488-201ENSMUST00000117148 684 ntBASIC14.58□□□□□ -0.08
Rb1P13405 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rb1P13405 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rb1P13405 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rb1P13405 Gm43438-201ENSMUST00000198133 379 ntBASIC14.58□□□□□ -0.08
Rb1P13405 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.58□□□□□ -0.08
Rb1P13405 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.58□□□□□ -0.08
Rb1P13405 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rb1P13405 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Rb1P13405 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.58□□□□□ -0.08
Rb1P13405 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Rb1P13405 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rb1P13405 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rb1P13405 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rb1P13405 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rb1P13405 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.57□□□□□ -0.08
Rb1P13405 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rb1P13405 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rb1P13405 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rb1P13405 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rb1P13405 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms