Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.51□□□□□ -0.41
Ccl3P10855 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccl3P10855 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.51□□□□□ -0.41
Ccl3P10855 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl3P10855 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccl3P10855 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccl3P10855 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Carlr-201ENSMUST00000181515 2574 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.5□□□□□ -0.41
Ccl3P10855 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Ccl3P10855 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm8927-201ENSMUST00000181978 981 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm7287-201ENSMUST00000205267 602 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccl3P10855 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm3222-201ENSMUST00000071282 990 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.5□□□□□ -0.41
Ccl3P10855 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ccl3P10855 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl3P10855 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ccl3P10855 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.49□□□□□ -0.41
Ccl3P10855 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Gm11814-201ENSMUST00000119515 929 ntBASIC12.49□□□□□ -0.41
Ccl3P10855 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccl3P10855 Gm24420-201ENSMUST00000176676 59 ntBASIC12.49□□□□□ -0.41
Ccl3P10855 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Gm45784-201ENSMUST00000188360 142 ntBASIC12.49□□□□□ -0.41
Ccl3P10855 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Ccl3P10855 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccl3P10855 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Ccl3P10855 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl3P10855 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccl3P10855 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Gm26464-201ENSMUST00000157094 305 ntBASIC12.48□□□□□ -0.41
Ccl3P10855 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Gm8652-201ENSMUST00000181363 964 ntBASIC12.48□□□□□ -0.41
Ccl3P10855 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.48□□□□□ -0.41
Ccl3P10855 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms