Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Gm10253-201ENSMUST00000194270 940 ntBASIC15.51■□□□□ 0.07
Chmp6P0C0A3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Gm5779-201ENSMUST00000218467 910 ntBASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp6P0C0A3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm22065-201ENSMUST00000103753 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm22066-201ENSMUST00000103761 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24932-201ENSMUST00000103763 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24115-201ENSMUST00000103799 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm22190-201ENSMUST00000103827 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm22191-201ENSMUST00000103831 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24721-201ENSMUST00000103849 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm28018-201ENSMUST00000103869 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm26399-201ENSMUST00000103937 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm25948-201ENSMUST00000175334 112 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm25349-201ENSMUST00000177728 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm23616-201ENSMUST00000177797 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm25871-201ENSMUST00000177816 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24752-201ENSMUST00000178240 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24496-201ENSMUST00000178287 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm25649-201ENSMUST00000178476 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm25548-201ENSMUST00000178681 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm23147-201ENSMUST00000178841 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm26095-201ENSMUST00000179270 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm22171-201ENSMUST00000179283 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm23936-201ENSMUST00000179354 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm22619-201ENSMUST00000179516 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm25255-201ENSMUST00000179579 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24755-201ENSMUST00000179691 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm26506-201ENSMUST00000179692 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm25086-201ENSMUST00000179931 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm23243-201ENSMUST00000180047 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24659-201ENSMUST00000180212 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm24169-201ENSMUST00000180244 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm23689-201ENSMUST00000180354 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm27359-201ENSMUST00000184153 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm27785-201ENSMUST00000184268 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm27466-201ENSMUST00000184396 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm27703-201ENSMUST00000184836 110 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp6P0C0A3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Gm23547-201ENSMUST00000158210 271 ntBASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Gm18049-201ENSMUST00000208909 581 ntBASIC15.49■□□□□ 0.07
Chmp6P0C0A3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp6P0C0A3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.49■□□□□ 0.07
Chmp6P0C0A3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms