Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vti1bO88384 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vti1bO88384 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.58□□□□□ -0.24
Vti1bO88384 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Gm10175-201ENSMUST00000086013 645 ntBASIC13.58□□□□□ -0.24
Vti1bO88384 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Vti1bO88384 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vti1bO88384 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vti1bO88384 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.57□□□□□ -0.24
Vti1bO88384 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.57□□□□□ -0.24
Vti1bO88384 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.57□□□□□ -0.24
Vti1bO88384 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.57□□□□□ -0.24
Vti1bO88384 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.57□□□□□ -0.24
Vti1bO88384 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.57□□□□□ -0.24
Vti1bO88384 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Vti1bO88384 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Vti1bO88384 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vti1bO88384 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.57□□□□□ -0.24
Vti1bO88384 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vti1bO88384 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.56□□□□□ -0.24
Vti1bO88384 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Vti1bO88384 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.56□□□□□ -0.24
Vti1bO88384 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vti1bO88384 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Gm9385-201ENSMUST00000117563 472 ntBASIC13.56□□□□□ -0.24
Vti1bO88384 Gm16026-204ENSMUST00000162652 683 ntBASIC13.56□□□□□ -0.24
Vti1bO88384 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vti1bO88384 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Vti1bO88384 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vti1bO88384 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.56□□□□□ -0.24
Vti1bO88384 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vti1bO88384 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1bO88384 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.55□□□□□ -0.24
Vti1bO88384 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1bO88384 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Vti1bO88384 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1bO88384 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1bO88384 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1bO88384 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms