Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pdlim1O70400 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim1O70400 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.05□□□□□ -0.16
Pdlim1O70400 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.05□□□□□ -0.16
Pdlim1O70400 Gm27306-201ENSMUST00000183970 107 ntBASIC14.05□□□□□ -0.16
Pdlim1O70400 Gm27321-201ENSMUST00000185021 205 ntBASIC14.05□□□□□ -0.16
Pdlim1O70400 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.05□□□□□ -0.16
Pdlim1O70400 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.05□□□□□ -0.16
Pdlim1O70400 Gm9229-201ENSMUST00000222777 126 ntBASIC14.05□□□□□ -0.16
Pdlim1O70400 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pdlim1O70400 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pdlim1O70400 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.05□□□□□ -0.16
Pdlim1O70400 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim1O70400 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pdlim1O70400 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gm13223-201ENSMUST00000118609 747 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gm6916-202ENSMUST00000205523 195 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gm46209-201ENSMUST00000217912 553 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim1O70400 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.04□□□□□ -0.16
Pdlim1O70400 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pdlim1O70400 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.03□□□□□ -0.16
Pdlim1O70400 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.03□□□□□ -0.16
Pdlim1O70400 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms