Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf13O54965 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf13O54965 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf13O54965 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf13O54965 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf13O54965 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf13O54965 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf13O54965 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf13O54965 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf13O54965 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Rnf13O54965 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rnf13O54965 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.9□□□□□ -0.34
Rnf13O54965 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Rnf13O54965 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf13O54965 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Rnf13O54965 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Gm8584-201ENSMUST00000171982 758 ntBASIC12.9□□□□□ -0.34
Rnf13O54965 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Gm27300-201ENSMUST00000184085 97 ntBASIC12.9□□□□□ -0.34
Rnf13O54965 Gm27335-201ENSMUST00000184758 97 ntBASIC12.9□□□□□ -0.34
Rnf13O54965 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rnf13O54965 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.9□□□□□ -0.34
Rnf13O54965 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf13O54965 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf13O54965 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf13O54965 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf13O54965 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf13O54965 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf13O54965 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.89□□□□□ -0.35
Rnf13O54965 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rnf13O54965 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rnf13O54965 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Rnf13O54965 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf13O54965 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Gm13884-201ENSMUST00000118103 829 ntBASIC12.89□□□□□ -0.35
Rnf13O54965 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.89□□□□□ -0.35
Rnf13O54965 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.89□□□□□ -0.35
Rnf13O54965 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.89□□□□□ -0.35
Rnf13O54965 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf13O54965 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rnf13O54965 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf13O54965 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf13O54965 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf13O54965 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf13O54965 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.88□□□□□ -0.35
Rnf13O54965 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rnf13O54965 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Rnf13O54965 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf13O54965 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf13O54965 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms