Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.9■□□□□ 0.3
Smarce1O54941 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smarce1O54941 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.9■□□□□ 0.3
Smarce1O54941 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.9■□□□□ 0.3
Smarce1O54941 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smarce1O54941 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.9■□□□□ 0.3
Smarce1O54941 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Gm11543-201ENSMUST00000120758 370 ntBASIC16.9■□□□□ 0.3
Smarce1O54941 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smarce1O54941 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smarce1O54941 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Smarce1O54941 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarce1O54941 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarce1O54941 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Smarce1O54941 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarce1O54941 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarce1O54941 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarce1O54941 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarce1O54941 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.89■□□□□ 0.29
Smarce1O54941 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarce1O54941 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.89■□□□□ 0.29
Smarce1O54941 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarce1O54941 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarce1O54941 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarce1O54941 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarce1O54941 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.88■□□□□ 0.29
Smarce1O54941 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.88■□□□□ 0.29
Smarce1O54941 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarce1O54941 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.88■□□□□ 0.29
Smarce1O54941 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarce1O54941 Rpph1-201ENSMUST00000175096 319 ntBASIC16.88■□□□□ 0.29
Smarce1O54941 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.88■□□□□ 0.29
Smarce1O54941 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.88■□□□□ 0.29
Smarce1O54941 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Smarce1O54941 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarce1O54941 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smarce1O54941 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.87■□□□□ 0.29
Smarce1O54941 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.87■□□□□ 0.29
Smarce1O54941 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smarce1O54941 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.87■□□□□ 0.29
Smarce1O54941 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.87■□□□□ 0.29
Smarce1O54941 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.87■□□□□ 0.29
Smarce1O54941 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarce1O54941 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Smarce1O54941 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.87■□□□□ 0.29
Smarce1O54941 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarce1O54941 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarce1O54941 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.86■□□□□ 0.29
Smarce1O54941 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms