Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Dkk1O54908 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Dkk1O54908 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Dkk1O54908 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Dkk1O54908 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm16198-201ENSMUST00000118766 670 ntBASIC12.88□□□□□ -0.35
Dkk1O54908 Gm14494-201ENSMUST00000118786 435 ntBASIC12.88□□□□□ -0.35
Dkk1O54908 Gm11278-201ENSMUST00000121002 997 ntBASIC12.88□□□□□ -0.35
Dkk1O54908 Gm12260-201ENSMUST00000122447 411 ntBASIC12.88□□□□□ -0.35
Dkk1O54908 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC12.88□□□□□ -0.35
Dkk1O54908 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm24551-201ENSMUST00000158645 92 ntBASIC12.88□□□□□ -0.35
Dkk1O54908 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.88□□□□□ -0.35
Dkk1O54908 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.88□□□□□ -0.35
Dkk1O54908 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.88□□□□□ -0.35
Dkk1O54908 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC12.88□□□□□ -0.35
Dkk1O54908 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.88□□□□□ -0.35
Dkk1O54908 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Dkk1O54908 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Dkk1O54908 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Dkk1O54908 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Dkk1O54908 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Dkk1O54908 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Dkk1O54908 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Gm5530-201ENSMUST00000117185 985 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Gm14503-201ENSMUST00000130337 1164 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC12.87□□□□□ -0.35
Dkk1O54908 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Gm28724-201ENSMUST00000186149 625 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Gm38177-201ENSMUST00000192213 1040 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Gm46209-201ENSMUST00000217912 553 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Gm40598-201ENSMUST00000222953 547 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms