Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ChkaO54804 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ChkaO54804 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
ChkaO54804 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ChkaO54804 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.38□□□□□ -0.11
ChkaO54804 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.38□□□□□ -0.11
ChkaO54804 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ChkaO54804 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ChkaO54804 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.37□□□□□ -0.11
ChkaO54804 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Gm11543-201ENSMUST00000120758 370 ntBASIC14.37□□□□□ -0.11
ChkaO54804 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.37□□□□□ -0.11
ChkaO54804 Gm11025-201ENSMUST00000140773 466 ntBASIC14.37□□□□□ -0.11
ChkaO54804 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Gm5264-201ENSMUST00000190584 848 ntBASIC14.37□□□□□ -0.11
ChkaO54804 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.37□□□□□ -0.11
ChkaO54804 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.37□□□□□ -0.11
ChkaO54804 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ChkaO54804 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ChkaO54804 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ChkaO54804 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ChkaO54804 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ChkaO54804 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.36□□□□□ -0.11
ChkaO54804 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.36□□□□□ -0.11
ChkaO54804 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.36□□□□□ -0.11
ChkaO54804 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.36□□□□□ -0.11
ChkaO54804 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ChkaO54804 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.36□□□□□ -0.11
ChkaO54804 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ChkaO54804 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ChkaO54804 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.35□□□□□ -0.11
ChkaO54804 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Acot6-202ENSMUST00000222921 3622 ntBASIC14.35□□□□□ -0.11
ChkaO54804 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ChkaO54804 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.35□□□□□ -0.11
ChkaO54804 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.35□□□□□ -0.11
ChkaO54804 Gm17271-201ENSMUST00000165535 355 ntBASIC14.35□□□□□ -0.11
ChkaO54804 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.35□□□□□ -0.11
ChkaO54804 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ChkaO54804 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms