Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.22■□□□□ 0.03
Cpsf2O35218 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.22■□□□□ 0.03
Cpsf2O35218 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cpsf2O35218 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf2O35218 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf2O35218 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpsf2O35218 Gm27741-201ENSMUST00000185060 237 ntBASIC15.21■□□□□ 0.03
Cpsf2O35218 Gm5364-201ENSMUST00000216789 889 ntBASIC15.21■□□□□ 0.03
Cpsf2O35218 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf2O35218 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf2O35218 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf2O35218 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf2O35218 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf2O35218 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Cpsf2O35218 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.2■□□□□ 0.02
Cpsf2O35218 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Matn2-206ENSMUST00000228570 2798 ntBASIC15.2■□□□□ 0.02
Cpsf2O35218 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cpsf2O35218 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.2■□□□□ 0.02
Cpsf2O35218 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cpsf2O35218 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.2■□□□□ 0.02
Cpsf2O35218 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf2O35218 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms