Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm10605-202ENSMUST00000183019 3198 ntBASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm8213-201ENSMUST00000118191 441 ntBASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcf11G3X9Z4 Gm8337-201ENSMUST00000187358 1938 ntBASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Gm10478-201ENSMUST00000084451 396 ntBASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcf11G3X9Z4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Gm4271-201ENSMUST00000174444 973 ntBASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcf11G3X9Z4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Gm12134-201ENSMUST00000122109 520 ntBASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcf11G3X9Z4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Gm22331-201ENSMUST00000158066 136 ntBASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Gm17330-201ENSMUST00000221047 165 ntBASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Gm37297-201ENSMUST00000192974 2384 ntBASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcf11G3X9Z4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Gm27847-201ENSMUST00000183711 107 ntBASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Gm27375-201ENSMUST00000183799 107 ntBASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Mir6420-201ENSMUST00000185032 102 ntBASIC21.14■□□□□ 0.98
Pcf11G3X9Z4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms