Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.34□□□□□ -0.27
Colca2F8VPY8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Colca2F8VPY8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Colca2F8VPY8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Colca2F8VPY8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Colca2F8VPY8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm11793-201ENSMUST00000120433 981 ntBASIC13.33□□□□□ -0.28
Colca2F8VPY8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm26927-201ENSMUST00000182385 965 ntBASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm29199-201ENSMUST00000187766 775 ntBASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm29741-201ENSMUST00000192667 421 ntBASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm43133-201ENSMUST00000197472 463 ntBASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.33□□□□□ -0.28
Colca2F8VPY8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.33□□□□□ -0.28
Colca2F8VPY8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Colca2F8VPY8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.32□□□□□ -0.28
Colca2F8VPY8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Colca2F8VPY8 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.31□□□□□ -0.28
Colca2F8VPY8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Colca2F8VPY8 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.31□□□□□ -0.28
Colca2F8VPY8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms