Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Gm44855-201ENSMUST00000205725 362 ntBASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.69■□□□□ 0.26
Pcdhb9E9Q5G2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Gm22189-201ENSMUST00000103822 86 ntBASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdhb9E9Q5G2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Gm4804-201ENSMUST00000182234 999 ntBASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhb9E9Q5G2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms