Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm45481-201ENSMUST00000209717 877 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Snora73b-201ENSMUST00000083419 205 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm15515-201ENSMUST00000117827 822 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Mir6973a-201ENSMUST00000183646 78 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm14608-201ENSMUST00000120030 1553 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm43692-201ENSMUST00000198236 1062 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm18204-201ENSMUST00000209835 793 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm43447-201ENSMUST00000198471 1535 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Mir7076-201ENSMUST00000183519 74 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm44329-201ENSMUST00000197469 112 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 CT485607.1-201ENSMUST00000216100 85 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm18974-201ENSMUST00000221478 1031 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm15432-201ENSMUST00000121106 195 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm44651-201ENSMUST00000207343 372 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC7.73□□□□□ -1.17
Herc1E9PZP8 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC7.73□□□□□ -1.17
Herc1E9PZP8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms