Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.73□□□□□ -0.37
Shank1D3YZU1 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.73□□□□□ -0.37
Shank1D3YZU1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.73□□□□□ -0.37
Shank1D3YZU1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.73□□□□□ -0.37
Shank1D3YZU1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shank1D3YZU1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Gm17795-201ENSMUST00000214505 757 ntBASIC12.72□□□□□ -0.37
Shank1D3YZU1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.72□□□□□ -0.37
Shank1D3YZU1 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.72□□□□□ -0.37
Shank1D3YZU1 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.72□□□□□ -0.37
Shank1D3YZU1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.72□□□□□ -0.37
Shank1D3YZU1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Shank1D3YZU1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shank1D3YZU1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm15460-201ENSMUST00000118147 391 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm14723-201ENSMUST00000118686 215 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm9726-201ENSMUST00000180321 678 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm18827-201ENSMUST00000188341 790 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm18054-201ENSMUST00000207539 555 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm10275-202ENSMUST00000168697 495 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm17794-201ENSMUST00000220252 955 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm10275-201ENSMUST00000092620 635 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.71□□□□□ -0.37
Shank1D3YZU1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.71□□□□□ -0.38
Shank1D3YZU1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.71□□□□□ -0.38
Shank1D3YZU1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shank1D3YZU1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Gm11524-201ENSMUST00000119349 807 ntBASIC12.7□□□□□ -0.38
Shank1D3YZU1 Gm24196-201ENSMUST00000179161 110 ntBASIC12.7□□□□□ -0.38
Shank1D3YZU1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.7□□□□□ -0.38
Shank1D3YZU1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms