Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc22a28B2RT89 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Gm44608-201ENSMUST00000206827 855 ntBASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Psmb5-202ENSMUST00000227257 622 ntBASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc22a28B2RT89 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Gm6973-201ENSMUST00000117080 721 ntBASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc22a28B2RT89 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Slc22a28B2RT89 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms