Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rrn3B2RS91 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrn3B2RS91 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrn3B2RS91 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Gm5566-201ENSMUST00000116118 459 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Gm13823-201ENSMUST00000119930 345 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Gm9719-201ENSMUST00000162765 543 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 AA543401-201ENSMUST00000164248 1269 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.34□□□□□ -0.11
Rrn3B2RS91 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rrn3B2RS91 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Rrn3B2RS91 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rrn3B2RS91 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rrn3B2RS91 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rrn3B2RS91 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm6222-201ENSMUST00000120787 396 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm29310-201ENSMUST00000185468 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21825-201ENSMUST00000185728 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm29109-201ENSMUST00000185895 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21896-201ENSMUST00000186520 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21873-201ENSMUST00000186728 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21794-201ENSMUST00000187056 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21880-201ENSMUST00000187275 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21826-201ENSMUST00000187451 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21198-201ENSMUST00000188393 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21749-201ENSMUST00000189343 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21901-201ENSMUST00000189568 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm29424-201ENSMUST00000189716 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm28599-201ENSMUST00000189838 694 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21867-201ENSMUST00000189917 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm29269-201ENSMUST00000190087 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21722-201ENSMUST00000190153 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm28423-201ENSMUST00000190701 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21899-201ENSMUST00000190745 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21910-201ENSMUST00000191163 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm29541-201ENSMUST00000191351 678 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21849-201ENSMUST00000191571 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm28678-201ENSMUST00000191593 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm20910-201ENSMUST00000193268 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm21871-201ENSMUST00000194621 696 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.33□□□□□ -0.12
Rrn3B2RS91 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms