Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm11618-201ENSMUST00000117946 267 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm37922-201ENSMUST00000195596 455 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Gm26315-201ENSMUST00000083890 321 ntBASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a6B1AVK5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Gm26083-201ENSMUST00000157904 193 ntBASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Gm27243-201ENSMUST00000183964 521 ntBASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a6B1AVK5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm13369-201ENSMUST00000119442 987 ntBASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm4857-201ENSMUST00000192718 785 ntBASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm37008-201ENSMUST00000195712 319 ntBASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Gm10146-201ENSMUST00000072739 309 ntBASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a6B1AVK5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms